PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G023700.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 217aa    MW: 24481.2 Da    PI: 7.7309
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G023700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like29.71.4e-091203655
             G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                        m++kgLtl+h+kSHLQkYRl
  Prupe.5G023700.3.p  1 MGLKGLTLYHLKSHLQKYRL 20
                        899****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.9E-8120IPR009057Homeodomain-like
PfamPF143791.5E-2370114IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MGLKGLTLYH LKSHLQKYRL GQHARKQNSG EEHNRENNRD SYVHFSNHHS TGSSAKSSRG  60
GNAEQGTLPF SEALKCQIEV QNRLQEQLEV QKKLQMRIEA QGKYLQAILE KAQKGLSLDM  120
KGPTTIEATR AQLTDFNLAL SNFMENINEE DRRGKSNGST FEIYEEGNTE EHKDAKLKVE  180
RGSINFDLNT KGSFDYVGSN AGDFEPRCFR LLDTTL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00544DAPTransfer from AT5G45580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G023700.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020418963.11e-158myb family transcription factor PHL11
TrEMBLA0A251P2K51e-158A0A251P2K5_PRUPE; Uncharacterized protein
STRINGXP_008238120.11e-149(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.18e-42G2-like family protein