PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G017700.1.p
Common NamePRUPE_ppa009580mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 287aa    MW: 33263.6 Da    PI: 8.8248
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G017700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix765.9e-2438120186
            trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         +W  +e+++Li++r e+e r ++ +k+ k+lWe+vs+km+ergf+r+p+qCk+kw+nl  ryk  ++++ +    s ++cp+f++l+
  Prupe.5G017700.1.p  38 QWAPEETRELIAIRGELEIRNSNlAKRSKALWEAVSSKMAERGFNRTPEQCKCKWKNLLIRYKGKETSDPE----SGRECPFFEELQ 120
                         7*****************9988768999************************************9999997....4667******98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007175.2E-43598IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.7E-63796IPR009057Homeodomain-like
SuperFamilySSF466891.96E-537103IPR009057Homeodomain-like
PROSITE profilePS500908.3743796IPR017877Myb-like domain
PfamPF138376.1E-2438121No hitNo description
CDDcd122032.45E-2038103No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MYGAGGDEEE GMAMGMGSGG TGMMKKMMTS PAGGGSGQWA PEETRELIAI RGELEIRNSN  60
LAKRSKALWE AVSSKMAERG FNRTPEQCKC KWKNLLIRYK GKETSDPESG RECPFFEELQ  120
AVFTERANNM QRLLLESETG SARSKKMGKR KLRPGRSSDE FSEDPDEEDE DDKKRKGERV  180
IMPKATNAAS GTSSSSIQDM LKAFFQQQQR MEMEWREMME RRAQERRMFE QEWRQKMEKV  240
ERERLMVEQA WREREEQRRI REESRAERRD ALLTTLLNKL INQTNF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144151KKMGKRKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209432.10.0hypothetical protein PRUPE_ppa009580mg
TrEMBLM5WBE20.0M5WBE2_PRUPE; Uncharacterized protein
STRINGGLYMA01G35370.24e-99(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17813385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.19e-28Trihelix family protein