PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G009600.1.p
Common NamePRUPE_ppa011225mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 219aa    MW: 25156.2 Da    PI: 5.1414
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G009600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.38.5e-21100160257
                         T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
            Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                         r+R+t+t+ ql+ Le+ Fe+ + +p +++++e++++l    +++e++V++WFqNrRa+ k+
  Prupe.5G009600.1.p 100 RQRWTPTPVQLQMLERIFEEgTGTPCKQKIKEITMELtqhgQISETNVYNWFQNRRARSKR 160
                         89*****************99**************************************97 PP

2Wus_type_Homeobox100.99e-3399162265
   Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                         ar+RWtPtp Q+++Le+++++G+ tP k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
  Prupe.5G009600.1.p  99 ARQRWTPTPVQLQMLERIFEEGTGTPCKQKIKEITMELTQHGQISETNVYNWFQNRRARSKRKQ 162
                         789***********************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-1794164IPR009057Homeodomain-like
PROSITE profilePS5007114.31796161IPR001356Homeobox domain
SMARTSM003899.9E-1398165IPR001356Homeobox domain
SuperFamilySSF466892.65E-1799163IPR009057Homeodomain-like
PfamPF000461.1E-18100160IPR001356Homeobox domain
CDDcd000863.64E-13100162No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MMEWQQQQQQ QIQNQQQIIH HLQNPEDGIG NGNGGLYVKV MTDEQMELLR RQIAVYATIC  60
EQLVEMHKAV TAQQDLTGMR LGNFYCDPFM ASGGHKITAR QRWTPTPVQL QMLERIFEEG  120
TGTPCKQKIK EITMELTQHG QISETNVYNW FQNRRARSKR KQSVPAQNNG ESEAEPEVES  180
PRDEKTKPED IMSLDNSAPR AENMYLQSPE LGFGNFDW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153161RRARSKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209586.11e-164hypothetical protein PRUPE_ppa011225mg
SwissprotQ5QMM31e-78WOX8_ORYSJ; WUSCHEL-related homeobox 8
TrEMBLM5WVH21e-164M5WVH2_PRUPE; Uncharacterized protein
STRINGVIT_18s0122g01140.t011e-101(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18553493
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.18e-75WUSCHEL related homeobox 13