PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G151900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 255aa    MW: 29516.9 Da    PI: 4.9011
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G151900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.21.9e-2471381128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sg 81 
                         +p+G++F+P++eel  +yL ++++g++ ++  +++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++    +g
  Prupe.4G151900.1.p   7 VPVGYKFRPSEEELFLHYLLPRLNGEDYPI-GIVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGTRFCRTVGaagTG 94 
                         599***************************.89*******9879****7423322..24355688******************64334499 PP

                 NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +Wk   + k++ +  g+++g++k + + +  +p+    +W+mhe++l
  Prupe.4G151900.1.p  95 VWKGEDSGKKIRA-CGSDIGIRKRFRYMNPGSPH--DDRWIMHEFQL 138
                         9***********9.999***********655555..89*******98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-304159IPR003441NAC domain
PROSITE profilePS5100529.8597159IPR003441NAC domain
PfamPF023657.1E-168138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MGGYYQVPVG YKFRPSEEEL FLHYLLPRLN GEDYPIGIVP DCDLYGTKEP WEIWRDFHHS  60
SPDDQEDIYV FTTLKKKTPN GTRFCRTVGA AGTGVWKGED SGKKIRACGS DIGIRKRFRY  120
MNPGSPHDDR WIMHEFQLDE SLLRVRNKET IVLCLVRKKE TSGKRKLEEL QDHEDVPPRG  180
EIQAQHVHDD QQHHIGPSTY DQLRVLDLTN DVEGEDDMVN PTLLAQYDQQ EHLGTSTDDQ  240
LIRFLEDYLD VEQN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-18616516171NO APICAL MERISTEM PROTEIN
1ut4_B5e-18616516171NO APICAL MERISTEM PROTEIN
1ut7_A5e-18616516171NO APICAL MERISTEM PROTEIN
1ut7_B5e-18616516171NO APICAL MERISTEM PROTEIN
3swm_A6e-18616519174NAC domain-containing protein 19
3swm_B6e-18616519174NAC domain-containing protein 19
3swm_C6e-18616519174NAC domain-containing protein 19
3swm_D6e-18616519174NAC domain-containing protein 19
3swp_A6e-18616519174NAC domain-containing protein 19
3swp_B6e-18616519174NAC domain-containing protein 19
3swp_C6e-18616519174NAC domain-containing protein 19
3swp_D6e-18616519174NAC domain-containing protein 19
4dul_A5e-18616516171NAC domain-containing protein 19
4dul_B5e-18616516171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G151900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934141e-161KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008226305.21e-160PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 66-like
TrEMBLA0A251PKX60.0A0A251PKX6_PRUPE; Uncharacterized protein
STRINGXP_008226305.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.11e-22NAC domain protein 66