PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G107000.1.p
Common NamePRUPE_ppa021227mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 350aa    MW: 38594.3 Da    PI: 8.8464
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G107000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.82.2e-1622112279
            trihelix   2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstc 79 
                         Wt  e++ Liea++ ++er  +++             ++ +W++v ++++++g+ rs++qC++kw+nl ++ykk++e e+++ ++e+ s +
  Prupe.4G107000.1.p  22 WTVGETMILIEAKKMDDERRMKRSgdaagsetrsskPAELRWKWVEDYCWKKGCLRSQNQCNDKWDNLMRDYKKVREYERREgREEAASYW 112
                         *************96655555432234444445444999****************************************996344444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.691490IPR017877Myb-like domain
PfamPF138373.3E-1321115No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MADQGGNGTS SVIMRDYRKG NWTVGETMIL IEAKKMDDER RMKRSGDAAG SETRSSKPAE  60
LRWKWVEDYC WKKGCLRSQN QCNDKWDNLM RDYKKVREYE RREGREEAAS YWKLEKSERK  120
DRNLPTNMVP QIYEALVDVV EKREAGHHQI RVVGGASVSG SNVPNPTIGY VVERPIISTS  180
VHQASLPPPV LQHHISVPPI AALPLLPPAP LAAQPPPTLP YSQPMPTVDS ETSHEHSDSP  240
AKRRRRASGG GGGGGDQGTS GTVSASTSSE VGTAISRGAS MIAEALQGCE EREERRHRDL  300
LSLHERRLQI EETKTEINRQ GINGLIDAIN KLADSIHALA SNKNQSPPK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G107000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007213081.10.0uncharacterized protein LOC18778848 isoform X2
TrEMBLM5X5C20.0M5X5C2_PRUPE; Uncharacterized protein
STRINGEMJ142800.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.14e-60Trihelix family protein