PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G101100.1.p
Common NamePRUPE_ppa004535mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 515aa    MW: 55630.3 Da    PI: 6.4732
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G101100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.8e-31287345259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Prupe.4G101100.1.p 287 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 345
                         699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.925281347IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-30283347IPR003657WRKY domain
SuperFamilySSF1182903.79E-26284347IPR003657WRKY domain
SMARTSM007741.4E-37286346IPR003657WRKY domain
PfamPF031061.2E-25288345IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MCSLFMPITR MENYQGDLTD ILRAGSAATS AAGAYHSDHL LHHHHQEPEA AADSWHFPSD  60
HPPPMKFSSA SSAMEEEEEE DAKDNFGDPF SSYMRDPLLH ELDISSSSSF FISPNSSSDM  120
NINITSVDEA GGTSSTFGGA HIVLAPPPPP PHHHHLHHHQ QGGVVDGDPI KRPCNIFSRM  180
LQISPSAKVP VTACDSPLLG AATAVSSPRG ISKAVSGSIS GAMVGSDMII NGNSSSGKGC  240
LLENTGVQIS SPRNPGIKRR KSQAKKVVCI PAPAAANSRP TGEVVPSDLW AWRKYGQKPI  300
KGSPYPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ  360
PSKSSAGSKT SSNSSHQPHQ KPASPTKEEQ NETMNDNNHV SPVITAGSAS TVKEEFEDIE  420
KQLELDHQAG FPYRPSMPDD QSNQSHHNED FFADLGEIEA DPLNLLFSQC FTADEQQKGS  480
KAAALDPFNL FDWSGDQNTN NNTTSFGEAA KRRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-25261348280Disease resistance protein RRS1
5w3x_D2e-25261348280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G101100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007211832.20.0probable WRKY transcription factor 14
TrEMBLA0A251PIB60.0A0A251PIB6_PRUPE; Uncharacterized protein
STRINGEMJ130310.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-89WRKY DNA-binding protein 14