PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G000800.3.p
Common NameAPL, PRUPE_ppa009148mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 255aa    MW: 27552.2 Da    PI: 7.3071
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G000800.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.25.7e-169382655
             G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                        +AtPk+i+++m+vkgLtl h+kSHLQkYRl
  Prupe.4G000800.3.p  9 EATPKAIMRTMNVKGLTLFHLKSHLQKYRL 38
                        69***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.8E-14839IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-10939IPR006447Myb domain, plants
SuperFamilySSF466896.63E-6940IPR009057Homeodomain-like
PfamPF143792.5E-1579124IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MRACILFAEA TPKAIMRTMN VKGLTLFHLK SHLQKYRLGK QSGKEMGDVS KDASYLLESP  60
GTGNSSPNLP TSDLNEGYEV KEALRAQMEV QSKLHVQVEA EKHLQIRQDA ERRYMAMLER  120
ACKMLADQFI GGSVTDTDSH KCHGLGNKNT KGPSLDPLGF YSLQSTDVAA VHGPEEEVPT  180
SIHTQRADCS TESCLTSHES PGGLTLEGSP GGGKKRMLSL DSAAASLIWG EAKVRTQEIN  240
VAAVNPHGIA RYGM*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.206440.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G000800.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934050.0KT893405.1 Prunus persica cultivar Jinliuzaohong Myb family transcription factor APL (APL) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020417260.10.0protein PHR1-LIKE 2 isoform X1
TrEMBLA0A251PDI30.0A0A251PDI3_PRUPE; Uncharacterized protein
STRINGEMJ128770.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.11e-40G2-like family protein