PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G157100.1.p
Common NamePRUPE_ppa021711mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 462aa    MW: 51713 Da    PI: 6.3279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G157100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-19217267256
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Prupe.3G157100.1.p 217 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 267
                         59******9.**********955...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.62E-33216276No hitNo description
SuperFamilySSF541717.19E-23217275IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.9E-32217275IPR001471AP2/ERF domain
PROSITE profilePS5103222.998217274IPR001471AP2/ERF domain
SMARTSM003801.5E-40217280IPR001471AP2/ERF domain
PRINTSPR003678.3E-11218229IPR001471AP2/ERF domain
PfamPF008472.7E-12218267IPR001471AP2/ERF domain
PRINTSPR003678.3E-11240256IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MAAAKKSGKS KKGVEESEME TSLDWEINED KDLGFSFESQ PWKLGFNEAS MMSKRPLKKI  60
KSPERQDPIQ SSASSAHQAT SSTTPCPSSS SSRIVFPFAF DGSQQPVQFP NQFNTTAVPI  120
YPSPFSQQQQ QQQNQQQMIS FASQQQQQQQ QHGMSYPPPF LGDSTTWQQQ QQHQILQYWS  180
DALNLSPRGR VMMMNRLGPD GRPLFRPPAM PYNTTKLYRG VRQRHWGKWV AEIRLPRNRT  240
RLWLGTFDTA EDAAMAYDRE AFKLRGENAR LNFPELFLNK DNTSVSTAPS STATSPTAHE  300
SSMPTTTRNR KQSRKVQKNP KASNTEAMPP PPPPQAHTEE DNTDDDSGLG SSEAKTSDEF  360
QANMNAAGGG NSQPEELVWG DMAEAWMNAI PAGWGPGSPV WDDLDTNNNL LLQSHLPFTN  420
PNQQNFNNIC PELERQQDHS GSASSSSSSY PLKNFFWKDQ D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-20216274160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007216848.10.0hypothetical protein PRUPE_ppa021711mg
TrEMBLM5WW710.0M5WW71_PRUPE; Uncharacterized protein
STRINGPOPTR_0013s13920.11e-156(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-55ERF family protein