PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G275700.1.p
Common NamePRUPE_ppa021631mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 318aa    MW: 35412.8 Da    PI: 4.9178
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G275700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.00081727323
                        ETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                        C++C+k+F +   +  H+r+H
  Prupe.2G275700.1.p  7 CKICNKRFANGKAMGGHMRSH 27
                        *******************99 PP

2zf-C2H213.20.00028177199123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ykC+ C+k F++   L  H  +H
  Prupe.2G275700.1.p 177 YKCETCNKAFRSYQALGGHRASH 199
                         9***********99999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.67E-8427No hitNo description
PfamPF139121.0E-8429IPR007087Zinc finger, C2H2
PROSITE profilePS501579.972532IPR007087Zinc finger, C2H2
SMARTSM003550.12527IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280727IPR007087Zinc finger, C2H2
SuperFamilySSF576671.67E-8172199No hitNo description
PfamPF139124.6E-11177201IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.346177199IPR007087Zinc finger, C2H2
SMARTSM003550.024177199IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280179199IPR007087Zinc finger, C2H2
PfamPF139123.6E-7245268IPR007087Zinc finger, C2H2
PROSITE profilePS501579.681246268IPR007087Zinc finger, C2H2
SMARTSM003550.61246268IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280248268IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MEKHRICKIC NKRFANGKAM GGHMRSHLAK LPLPAKPQSP QQQQQLSNSP ESSPPLSSTN  60
RAMHSSPSLD SAIHDGDSDT ESHPRNPTRR RSKRRRKVIG KAAEAALEAE QVSSVSDAFS  120
TEDVARCLIM LSMDKWGKWE KAKLKKQVDE SVDEDEDEDE DESAFQAQTG ALTQGKYKCE  180
TCNKAFRSYQ ALGGHRASHK KIIKTQVFDV EDDDDDDFEE EEEEDDDVIG NNGNSGNLVV  240
DQQRTFECSF CFKQFDSGQA LGGHKKVHYY NNLTHNARNV SSSSTNFVDN LVIDLNLPAP  300
EEEDGELSQL EFSTVSD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G275700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007219537.20.0zinc finger protein ZAT9
TrEMBLM5X5G80.0M5X5G8_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ207360.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76734122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.18e-36C2H2-like zinc finger protein