PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G253000.1.p
Common NamePRUPE_ppa015230mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 347aa    MW: 37474.1 Da    PI: 7.0325
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G253000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-1859108255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  Prupe.2G253000.1.p  59 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 108
                         59****999.**********954...5**********************98876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.27359116IPR001471AP2/ERF domain
PfamPF008476.2E-1259104IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2059116IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-2959116IPR001471AP2/ERF domain
SMARTSM003803.1E-3759122IPR001471AP2/ERF domain
CDDcd000181.65E-2059118No hitNo description
PRINTSPR003672.7E-106071IPR001471AP2/ERF domain
PRINTSPR003672.7E-108298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MEDEHPLSPP AAPPHHPPQD NDNNNKSPDS TTASTATTPT ETNNKKCKGK GGPDNNKFRY  60
RGVRQRSWGK WVAEIREPRK RTRKWLGTFA TAEDAARAYD RAAIILYGSR AQLNLQPSGA  120
NSQSSTRGSS SSSSSCNSSA QTLRPLLPRP SGFGLTLPFP SSAHPVPLMA SGFVPYGVGV  180
GVYPSVAAAA TSSVQLSQHH PHHINMRGQD NLQNNPLLHQ QQQQQQQVVV QQFHHQYPVS  240
DGGGGDTSTS YQNPNPSHDQ YQQLLHHNQN NQADSCSFDD GNSIMGSGLS LSSSQPMPVA  300
PGCSDPMSGV GPMSPLMWPL TSEEECAPSL WDYGDPFFLD FKGFDS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1860115359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00674SELEXTransfer from GRMZM2G093595Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007221036.10.0hypothetical protein PRUPE_ppa015230mg, partial
TrEMBLM5XT700.0M5XT70_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_13s0067g01400.t018e-61(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF88472940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.13e-30ERF family protein