PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G229300.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 178aa    MW: 20790.7 Da    PI: 9.077
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G229300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like40.36.9e-13124170550
             G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkv.kgLtlehvkSHL 50 
                          Wtp  He  veav qLGG  kAt k il+l++   gLt+e v  HL
  Prupe.2G229300.2.p 124 SWTPVYHEDLVEAVIQLGGLGKATAKGILKLLENhRGLTVEAVSYHL 170
                         7******************************97527**********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.4E-10123170IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MMEVDGENHD EGLERNYQRR PQTRRRSRVE AIEWTLEHHK QFVDTMNRLY LGDLTVRTPR  60
RAILIVELMN NEALRLIPRS TLLHHIGLFQ RFQSNQKANA HSVLTRDFER LNINKEEKQD  120
LSFSWTPVYH EDLVEAVIQL GGLGKATAKG ILKLLENHRG LTVEAVSYHL FRCSFNF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11928RPQTRRRSRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G229300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008227545.18e-58PREDICTED: uncharacterized protein LOC103327046
TrEMBLA0A251QNB51e-128A0A251QNB5_PRUPE; Uncharacterized protein
STRINGXP_008227545.13e-57(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.32e-09G2-like family protein