PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G205700.1.p
Common NamePRUPE_ppa016651mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 360aa    MW: 39340.2 Da    PI: 8.1444
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G205700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00086141163123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         y+C+ C+++F++   L  H  +H
  Prupe.2G205700.1.p 141 YECKTCNRTFPSFQALGGHRASH 163
                         99**********99999998887 PP

2zf-C2H2130.00031231253123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ++C++Cg  F++   L  H+r+H
  Prupe.2G205700.1.p 231 HECSICGAEFTSGQALGGHMRRH 253
                         78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.68E-9140163No hitNo description
PfamPF139126.3E-13140165IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.637141168IPR007087Zinc finger, C2H2
SMARTSM003550.052141163IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280143163IPR007087Zinc finger, C2H2
SuperFamilySSF576677.68E-9226253No hitNo description
PfamPF139125.4E-13230255IPR007087Zinc finger, C2H2
SMARTSM003550.01231253IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.034231258IPR007087Zinc finger, C2H2
PROSITE patternPS000280233253IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MGCKEQHHNN IIIKGKRTKR LRPQSPIPFA IPTTSSSPED GGGGDGGGEN DYINSATNLS  60
PTTSVEFQDS TTEEEEDMAN CLILLAKGQS RAASSSPSHH HHQPHNDHNT TSRRFLEATT  120
AVGPTGAKAG AVAAGGGYHA YECKTCNRTF PSFQALGGHR ASHKKPKANT GDDQKNKHFA  180
IGLLPSDEED TQLFKNSILH NNNNTSSSPL SLHLSNRGLV LSSNKSSSKV HECSICGAEF  240
TSGQALGGHM RRHRAPAAAN TTLALTAPSV SAFEPQQHQN QHQQQQPIKK QRSVLSLDLD  300
LNLPAPEDDH HKESKFVFAT SKQQQQQQQQ QQQQQQQQQQ QQQQQPERLR TQILVDCHY*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00487DAPTransfer from AT5G04390Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G205700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007219175.20.0zinc finger protein ZAT5
TrEMBLM5X3540.0M5X354_PRUPE; Uncharacterized protein
STRINGEMJ203740.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58634141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.11e-51C2H2 family protein