PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G203100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 195aa    MW: 22756.9 Da    PI: 8.229
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G203100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM130.99.3e-41161441127
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                         lp+GfrF+Ptdeelv++yLk+kv+g ++++e +i+e+di+k+ePw+L  k  +k ++++ +fFs+   +y+++k+++r+t+ g+Wk tg++
  Prupe.2G203100.1.p  16 LPVGFRFRPTDEELVDYYLKNKVQGMDFHAEGIIDEIDILKFEPWNLVaKsLMKPDDENGFFFSQP--EYTQKKNTKRSTEVGFWKITGRE 104
                         79****************************999**************7443555566777999886..5677889**************** PP

                 NAM  90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                         +e+ ++  +++++g k++L+fy g+ +++ ktdWvmhey 
  Prupe.2G203100.1.p 105 HEIRTRdrRRTVIGKKRILTFYIGHGRNSDKTDWVMHEYY 144
                         ****99767778***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-4112152IPR003441NAC domain
PROSITE profilePS5100541.3116161IPR003441NAC domain
PfamPF023651.2E-2417144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MISFSRAAEE EGDLSLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW  60
NLVAKSLMKP DDENGFFFSQ PEYTQKKNTK RSTEVGFWKI TGREHEIRTR DRRRTVIGKK  120
RILTFYIGHG RNSDKTDWVM HEYYIPKAHP NANQRCRLAL EVTSFDFLLP LLSLHNWFSN  180
LIICRGTSFS VTVT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-261414315140NO APICAL MERISTEM PROTEIN
1ut4_B2e-261414315140NO APICAL MERISTEM PROTEIN
1ut7_A2e-261414315140NO APICAL MERISTEM PROTEIN
1ut7_B2e-261414315140NO APICAL MERISTEM PROTEIN
3swm_A2e-261414318143NAC domain-containing protein 19
3swm_B2e-261414318143NAC domain-containing protein 19
3swm_C2e-261414318143NAC domain-containing protein 19
3swm_D2e-261414318143NAC domain-containing protein 19
3swp_A2e-261414318143NAC domain-containing protein 19
3swp_B2e-261414318143NAC domain-containing protein 19
3swp_C2e-261414318143NAC domain-containing protein 19
3swp_D2e-261414318143NAC domain-containing protein 19
4dul_A2e-261414315140NAC domain-containing protein 19
4dul_B2e-261414315140NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G203100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220418.21e-111NAC domain-containing protein 5
TrEMBLA0A251QIP51e-143A0A251QIP5_PRUPE; Uncharacterized protein
STRINGEMJ219951e-112(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.21e-32NAC 014