PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G202900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 462aa    MW: 53884.4 Da    PI: 7.9348
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G202900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM140.88.1e-44141401127
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                         +p+GfrFhPtdeelv++yLkkk++g + +++++i+e+di+k+ePwdLp +  +k+++++w+fFs+ +    ++++knr+t++g+Wk tg++
  Prupe.2G202900.1.p  14 VPVGFRFHPTDEELVTHYLKKKLKGMDSHVSNIIREIDILKFEPWDLPeRsLLKSDDENWFFFSRPEY---NKHKKNRTTQEGFWKITGRE 101
                         599***************************99***************953467788899***999876...4579**************** PP

                 NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                         ++++++ +++++g k++L+fy+gr +++e+t+Wvmhey 
  Prupe.2G202900.1.p 102 HQIKARdSRSVIGRKRILTFYRGRVRSSERTNWVMHEYY 140
                         ****99666779**************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.07E-477159IPR003441NAC domain
PROSITE profilePS5100550.1514160IPR003441NAC domain
PfamPF023653.8E-2515140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MIVISRAAED DLSVPVGFRF HPTDEELVTH YLKKKLKGMD SHVSNIIREI DILKFEPWDL  60
PERSLLKSDD ENWFFFSRPE YNKHKKNRTT QEGFWKITGR EHQIKARDSR SVIGRKRILT  120
FYRGRVRSSE RTNWVMHEYY IPNDNPNAQR DFVLCRLKKN VKKSDENADV AATCDEGETH  180
NASDVENQQV NDMNMEDNRP PENLDYFERE RDRLLANSLS NNDHNAFPTE FSANDQEFLR  240
TLIVEPQSRE TSDTDREPVY HQSLQMRCEP QIPYELLQYG SSQSRRDTDV ILHNQLSRQA  300
SSSVNVASKA GTYQREHRPQ QQSGPIIVFR DTSADEYYTR EKTRRITYPP EKFGFLLQPK  360
EPEKPKPKPE KPKEPPYPRT AADFPPKQIS ITKSSIDKKV PQGSMEQTQN RTTPRNWKGS  420
FITWQTSPLT SPPSVYIFNT VLGAILFLFC VREVVLYGEW C*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-3161607170Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G202900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007218468.20.0NAC domain-containing protein 100 isoform X3
TrEMBLA0A251QM120.0A0A251QM12_PRUPE; Uncharacterized protein
STRINGXP_008244176.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.17e-44NAC transcription factor-like 9