PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G202700.6.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 371aa    MW: 42680.6 Da    PI: 4.2355
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G202700.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.41.6e-24108554128
                 NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++ ew+fFs rd ky++++r+nrat +g Wk tgk++ + ++ +++++g+k+t++fy+   pk++kt+Wvmhey+l
  Prupe.2G202700.6.p  10 HDMEWFFFSLRDYKYTNSNRSNRATPHGSWKITGKERMIRARgSNAVIGTKRTMTFYERGVPKSKKTNWVMHEYNL 85 
                         5679*************************************9666779**************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100532.6861109IPR003441NAC domain
PfamPF023651.0E-12885IPR003441NAC domain
SuperFamilySSF1019412.62E-299107IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MFTEQDSPYH DMEWFFFSLR DYKYTNSNRS NRATPHGSWK ITGKERMIRA RGSNAVIGTK  60
RTMTFYERGV PKSKKTNWVM HEYNLFESEA SPDPQLAERD FVLCRTKKNP DKKDTSVFAE  120
GEPSSYNLYN CEDEAAADVT PESQDHSPST LQSPAYIELG DVLQVNVLHE DCKDMQSPFG  180
DNDYSVTDKN YFSTFDEGEP HGFTVSDIEN EVACDMSQEL YAQQEKNSYR LTPQSPTFRN  240
LEDFMYINAS DFGNETANNM VLEQAQDYYS FTLPSPIYSE LGSVPHFDVY NNEWKSTYAN  300
FENQTTDERI SEECPQPKEN LRSILSASQL EDYTSQTLMD TEEYQMRPCE IGREGAAGMN  360
WEGSFFNIFP *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-19910968165NO APICAL MERISTEM PROTEIN
1ut4_B8e-19910968165NO APICAL MERISTEM PROTEIN
1ut7_A8e-19910968165NO APICAL MERISTEM PROTEIN
1ut7_B8e-19910968165NO APICAL MERISTEM PROTEIN
3swm_A1e-18910971168NAC domain-containing protein 19
3swm_B1e-18910971168NAC domain-containing protein 19
3swm_C1e-18910971168NAC domain-containing protein 19
3swm_D1e-18910971168NAC domain-containing protein 19
3swp_A1e-18910971168NAC domain-containing protein 19
3swp_B1e-18910971168NAC domain-containing protein 19
3swp_C1e-18910971168NAC domain-containing protein 19
3swp_D1e-18910971168NAC domain-containing protein 19
4dul_A8e-19910968165NAC domain-containing protein 19
4dul_B8e-19910968165NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G202700.6.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411929.10.0NAC domain-containing protein 83 isoform X1
TrEMBLA0A251QIS90.0A0A251QIS9_PRUPE; Uncharacterized protein
STRINGXP_008244181.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.18e-26NAC domain containing protein 96