PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G202700.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 432aa    MW: 49980.9 Da    PI: 4.3221
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G202700.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM142.23e-44141471128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.....eekewyfFskrdkkyatgkrknratksgyWka 85 
                         +p GfrFhPt+eelv++yLk+k +++++++ ++i+e+di+k++Pw++p  ++++     ++ ew+fFs rd ky++++r+nrat +g Wk 
  Prupe.2G202700.4.p  14 MPLGFRFHPTEEELVDYYLKNKRQDRDFNV-NHIPEIDICKYDPWEIPgLMFTEqdspyHDMEWFFFSLRDYKYTNSNRSNRATPHGSWKI 103
                         699***************************.88***************54333323344667***************************** PP

                 NAM  86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         tgk++ + ++ +++++g+k+t++fy+   pk++kt+Wvmhey+l
  Prupe.2G202700.4.p 104 TGKERMIRARgSNAVIGTKRTMTFYERGVPKSKKTNWVMHEYNL 147
                         *********9666779**************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-5013169IPR003441NAC domain
PROSITE profilePS5100548.74614171IPR003441NAC domain
PfamPF023652.0E-2415147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MGSKCYRKTE GDPMPLGFRF HPTEEELVDY YLKNKRQDRD FNVNHIPEID ICKYDPWEIP  60
GLMFTEQDSP YHDMEWFFFS LRDYKYTNSN RSNRATPHGS WKITGKERMI RARGSNAVIG  120
TKRTMTFYER GVPKSKKTNW VMHEYNLFES EASPDPQLAE RDFVLCRTKK NPDKKDTSVF  180
AEGEPSSYNL YNCEDEAAAD VTPESQDHSP STLQSPAYIE LGDVLQVNVL HEDCKDMQSP  240
FGDNDYSVTD KNYFSTFDEG EPHGFTVSDI ENEVACDMSQ ELYAQQEKNS YRLTPQSPTF  300
RNLEDFMYIN ASDFGNETAN NMVLEAQDYY SFTLPSPIYS ELGSVPHFDV YNNEWKSTYA  360
NFENQTTDER ISEECPQPKE NLRSILSASQ LEDYTSQTLM DTEEYQMRPC EIGREGAAGM  420
NWEGSFFNIF P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-341417117165NO APICAL MERISTEM PROTEIN
1ut4_B2e-341417117165NO APICAL MERISTEM PROTEIN
1ut7_A2e-341417117165NO APICAL MERISTEM PROTEIN
1ut7_B2e-341417117165NO APICAL MERISTEM PROTEIN
3swm_A2e-341417120168NAC domain-containing protein 19
3swm_B2e-341417120168NAC domain-containing protein 19
3swm_C2e-341417120168NAC domain-containing protein 19
3swm_D2e-341417120168NAC domain-containing protein 19
3swp_A2e-341417120168NAC domain-containing protein 19
3swp_B2e-341417120168NAC domain-containing protein 19
3swp_C2e-341417120168NAC domain-containing protein 19
3swp_D2e-341417120168NAC domain-containing protein 19
4dul_A2e-341417117165NAC domain-containing protein 19
4dul_B2e-341417117165NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G202700.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220422.20.0NAC domain-containing protein 83 isoform X2
TrEMBLA0A251QIS80.0A0A251QIS8_PRUPE; Uncharacterized protein
STRINGXP_008244181.11e-179(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-45NAC domain containing protein 71