PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G202500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 445aa    MW: 51288.6 Da    PI: 4.6419
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G202500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.35.8e-44151491128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                         +p+GfrFhPt+eelv++yLkkk  +k+++++++i+e+  +k+ePwdLp           ++ ew+fFs rd ky +++r+nrat++gyWk 
  Prupe.2G202500.1.p  15 VPVGFRFHPTEEELVNHYLKKKKWDKDFKVNHIIPEIAFCKHEPWDLPGllftepDSPYHDMEWFFFSLRDYKYINSNRSNRATRKGYWKI 105
                         599***************************999***************54565543333788***************************** PP

                 NAM  86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         tgk++ + ++ ++ ++g k+tL+fy+gr pk++kt+Wv+hey l
  Prupe.2G202500.1.p 106 TGKERVIRARgSKFVIGRKRTLTFYEGRVPKSKKTNWVVHEYYL 149
                         ********98445569**************************76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-4911173IPR003441NAC domain
PROSITE profilePS5100550.1515173IPR003441NAC domain
PfamPF023659.0E-2416148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MDGKHNRKTT GGISVPVGFR FHPTEEELVN HYLKKKKWDK DFKVNHIIPE IAFCKHEPWD  60
LPGLLFTEPD SPYHDMEWFF FSLRDYKYIN SNRSNRATRK GYWKITGKER VIRARGSKFV  120
IGRKRTLTFY EGRVPKSKKT NWVVHEYYLI EDEANSNPKL AQRDFVLCRL KKKPDKKDTS  180
ICAEGEPSNC NLSNCEDQVA AVVTPESQDH SPSTLQSPAS IELGDVLQAN GINEDCNEMQ  240
SPFGDNEYHV TDNNDISTCD EGEPHGFTMS DFENEVADDM SQELYAQQER NLDPTYTELE  300
GFMYIDAFSF ENKAGEQQCA QPEKNLDPRF HPPQPHDYCS STLQSPIYTE LGSVPHANVY  360
NDQWQSTYDG NGQARNTIAN FENQTTYERI SEEYPQQEEN LELIFHAPQL QDYTLQPLMN  420
TEVGDVLHDN NYIECNELQS PVWS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-361317315165NO APICAL MERISTEM PROTEIN
1ut4_B1e-361317315165NO APICAL MERISTEM PROTEIN
1ut7_A1e-361317315165NO APICAL MERISTEM PROTEIN
1ut7_B1e-361317315165NO APICAL MERISTEM PROTEIN
3swm_A1e-361317318168NAC domain-containing protein 19
3swm_B1e-361317318168NAC domain-containing protein 19
3swm_C1e-361317318168NAC domain-containing protein 19
3swm_D1e-361317318168NAC domain-containing protein 19
3swp_A1e-361317318168NAC domain-containing protein 19
3swp_B1e-361317318168NAC domain-containing protein 19
3swp_C1e-361317318168NAC domain-containing protein 19
3swp_D1e-361317318168NAC domain-containing protein 19
4dul_A1e-361317315165NAC domain-containing protein 19
4dul_B1e-361317315165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G202500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220850.20.0uncharacterized protein LOC18786544
TrEMBLA0A251QIP10.0A0A251QIP1_PRUPE; Uncharacterized protein
STRINGXP_008244182.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14450518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.35e-48NAC transcription factor-like 9