PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G202200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 492aa    MW: 55687 Da    PI: 4.6075
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G202200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.29e-25192063128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkklelee...............................vikevdiykvePwdLpk............. 49 
                         p frF+P+de +v + L kk++gk+ ++                                 +i+e+d yk+ePwdL               
  Prupe.2G202200.1.p  19 PEFRFRPSDEKMV-NLLWKKINGKDYQVMPeinykpwdlpdnesiplflrflkqlmqgkasIIPEIDFYKHEPWDLAGnlslslftfhfli 108
                         679**********.99*********666435678899999999****************988**************845899********* PP

                 NAM  50 .................kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdW 121
                                              + + w+ Fs+ d ky  + r+nr t++g+Wk tg+ +ev+s+  +++l+  kktL+f+ gr +k++ktdW
  Prupe.2G202200.1.p 109 sktcfvlhfagaglmfpDSPYQARTWFCFSRPDYKYVDSPRRNRLTEKGFWKITGQPREVKSRqlSKSLTCKKKTLTFHLGRPKKSSKTDW 199
                         999999998888776663334789**************************************97777779999****************** PP

                 NAM 122 vmheyrl 128
                         v +ey l
  Prupe.2G202200.1.p 200 VKQEYYL 206
                         *****87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.72617229IPR003441NAC domain
PfamPF023656.3E-1219205IPR003441NAC domain
SuperFamilySSF1019411.44E-21130229IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MSSSSSTTTT EAWVLDLLPE FRFRPSDEKM VNLLWKKING KDYQVMPEIN YKPWDLPDNE  60
SIPLFLRFLK QLMQGKASII PEIDFYKHEP WDLAGNLSLS LFTFHFLISK TCFVLHFAGA  120
GLMFPDSPYQ ARTWFCFSRP DYKYVDSPRR NRLTEKGFWK ITGQPREVKS RQLSKSLTCK  180
KKTLTFHLGR PKKSSKTDWV KQEYYLTPND PGSNPNQLSG LVLYRVKYRS ADYESDNNYV  240
LGTGNLNDGE PGGFVSSDFD DMIQEPCDQQ EHLDSPSPPP EPPRPHQLPQ LGNVHGSTGD  300
YIASNSDNQA AAIHHMITDE EELLAYKELE RVLLGSGNPD DGEARTCVSS DMLRELCAQL  360
GEDLDSPFPP PGPPELGNAP DVYTDECRSW PSPIEDNDSS LPNKNNIPTN YDSKPVSNTA  420
SNFENQTKDE RIPEVYSQSE ENLQSFFRSL EVENYTLPSP ILYVEQGDVL HANNYIGCNE  480
SQYAALFPQS S*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G202200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412379.10.0NAC domain-containing protein 101
TrEMBLA0A251QIY50.0A0A251QIY5_PRUPE; Uncharacterized protein
STRINGXP_008244234.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1714827
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.31e-20NAC domain containing protein 50