PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G202000.4.p
Common NamePRUPE_ppa026972mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 450aa    MW: 50404.6 Da    PI: 4.2838
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G202000.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.62.9e-41171492128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                          pGfrF Pt+e lv++yLkkk+egk+ +++++i+e+d++k+eP d p+      +  +e ew+fFs+ d ky++++r nrat++g+ k tg
  Prupe.2G202000.4.p  17 LPGFRFYPTEEVLVSYYLKKKTEGKDSDFSHIIPEIDVCKHEPCDVPAffeeaDFPDHEMEWFFFSQPDYKYTNSTRCNRATDQGFYKITG 107
                         69***************************999***************6455443444777******************************* PP

                 NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         k +e++++ +++++g k+tL+fy+gr p+++kt+W+mhey l
  Prupe.2G202000.4.p 108 KVREIKARrSKAVIGKKRTLTFYEGRVPNAKKTNWIMHEYYL 149
                         ******98566679**************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.02E-4412175IPR003441NAC domain
PROSITE profilePS5100546.17116175IPR003441NAC domain
PfamPF023654.8E-2118148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MSSISTMEEG DSIPVVLPGF RFYPTEEVLV SYYLKKKTEG KDSDFSHIIP EIDVCKHEPC  60
DVPAFFEEAD FPDHEMEWFF FSQPDYKYTN STRCNRATDQ GFYKITGKVR EIKARRSKAV  120
IGKKRTLTFY EGRVPNAKKT NWIMHEYYLT NTELAQLGPN TNQRKDFVLC RLKNKSANYK  180
KLKDDSICNE LADTGSGGGI ASNSEDDQAA GADMISEPLE HLASQEVGDV LNDNGSGLIE  240
NNDISICDDD QIDAWIFSDF DSQAAYDLLQ EQYCAEPGEN LDSPLPPPQP TLPPLPQDYC  300
SSTQQSPLYT NQGNVPCVYD GDCNRQQSPI GDRNSYLTHK NNMSMNNQIE PVSNITYGVQ  360
NRATGESNSE VYNNSTNDFK EPVCNITYNS NNGAPDERIL EGDGPKENLG SPFDPFQLLD  420
FTLLSPMNSE LGDFEHGNKL CWHAMSCNL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-281818117174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G202000.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412194.10.0protein NTM1-like 9 isoform X1
TrEMBLA0A251QJU10.0A0A251QJU1_PRUPE; Uncharacterized protein
STRINGEMJ210370.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-42NAC transcription factor-like 9