PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G201200.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 690aa    MW: 73167.3 Da    PI: 4.3825
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G201200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.68.3e-261843023128
                 NAM   3 pGfr.FhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                         pG++ F+Ptde+lv  yL++++egk+ e+ + i+ + + +k eP+dLp           fFsk d k+++ +r nr+t++g+ k+tgk +e
  Prupe.2G201200.2.p 184 PGVKlFSPTDEQLV-GYLTNQIEGKDSEFRDSIPVIdHACKREPRDLP---------AVFFSKPDYKNSKRDRCNRTTDEGFYKSTGKVRE 264
                         566659********.9*************999****669********9.........46******************************** PP

                 NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++++ +++++g k++L f +gr p+++kt+ vmhey+l
  Prupe.2G201200.2.p 265 IKAEqSQAVIGNKRILPFCEGRGPQAKKTKYVMHEYSL 302
                         **98456679**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-25182330IPR003441NAC domain
PROSITE profilePS5100525.394183330IPR003441NAC domain
PfamPF023654.6E-12185302IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    Send to blast
MAMAADAAAD KAAPALPPLT VKLDPTKYPL WLAQIIPLLK SKGLMSFVDG TAMCPPAFLL  60
DPDGKPTNTT HPDYDHWIQM DQFVLSLING SLSHLVVATL EGSISARATW VALEALLLGA  120
EQQVPTPTVS VSDHSTAAAA ASPGCGFDHV ASGGGGGGGG GGGGGGGGGG GTTGEGVSGK  180
KGLPGVKLFS PTDEQLVGYL TNQIEGKDSE FRDSIPVIDH ACKREPRDLP AVFFSKPDYK  240
NSKRDRCNRT TDEGFYKSTG KVREIKAEQS QAVIGNKRIL PFCEGRGPQA KKTKYVMHEY  300
SLTKTELAKM GVGPNPNQQE EFVLCCLKNK SANSKKLKDD SVCSSELAEL AIGGEIASNS  360
EDDQAAATGM IQGPDEHLAD KDVLLGTENR NECVESESPN GFSSTDNNDI STFVGSPGSF  420
DVPDGIFLSD FDDPIKELSC ADLGENTDST FLPPQQLAAT SATTPTLATS FGSFGVGLPD  480
DFSWPDFDDL LKELSCADLG ENTDSTLLPP QQLAATSATT PTLATSFGGF GVGSPDGFSW  540
PDFDDLLKEP FWADQPHQPP HPHQPPPASQ PHQPPPAPQS HQPPPPSQPQ NYCSSTLPSA  600
LCTKQGNVPS LCNDDCSKQL SPTGNNISTN YHYEPVSNTA YSVQNGATDE SFSEVRMSML  660
FELFFFSYEL FKYGAQELHP NLVLACYDS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151171SGGGGGGGGGGGGGGGGGGGT
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G201200.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412473.10.0uncharacterized protein LOC18787056
TrEMBLA0A251QIK80.0A0A251QIK8_PRUPE; Uncharacterized protein
STRINGXP_008244238.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.13e-23NAC 014