PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G185100.1.p
Common NamePRUPE_ppa007708mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 359aa    MW: 39637 Da    PI: 4.7326
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G185100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.94.3e-28128189159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v++++ dp+++++tY+geH+++
  Prupe.2G185100.1.p 128 LDDGYSWRKYGQKDILGATYPRGYYRCTHRgtqGCLATKQVQKADADPSTMVVTYRGEHTCS 189
                         59***************************99999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-28124190IPR003657WRKY domain
SuperFamilySSF1182904.97E-25127189IPR003657WRKY domain
PROSITE profilePS5081123.755128186IPR003657WRKY domain
SMARTSM007742.0E-39128190IPR003657WRKY domain
PfamPF031061.1E-25129188IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MEKRKNMEWE QKTLTSELTQ GKELAKQLMN YLHPSASQEK RDFLISKILF SYEKALSLLK  60
TDVGSDGESN HIPNTMLESP TSFGNGSPMS EISDQDCKNK NVFKKRKTMP RWTEEVKVFS  120
GTGLDGSLDD GYSWRKYGQK DILGATYPRG YYRCTHRGTQ GCLATKQVQK ADADPSTMVV  180
TYRGEHTCSQ VLQLARSSAL SLAKQASTGN QNATREAEKP EASQEMSFGF GAGLRVKTED  240
LDTREDDIFP SFSFPSTPIE PENVGDHIFC ATLMDGYSPT FASPAATFEP DYLQAVSPCQ  300
MSSFGLGLDY VQTSESGLSE IISAPTSVTN SPIGDFGFSL DDLDFHHFEN SESFAYES*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-20127188768OsWRKY45
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.160000.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G185100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007218193.10.0probable WRKY transcription factor 46
TrEMBLM5X0100.0M5X010_PRUPE; Uncharacterized protein
STRINGEMJ193920.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.16e-45WRKY family protein