PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G575600.1.p
Common NamePRUPE_ppa026935mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 119aa    MW: 13596.5 Da    PI: 9.7008
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G575600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.43.1e-112911840125
                 NAM  40 ykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmh 124
                         +k ePwd+ +    k  ++ +++yfF+k +  + +g+r  r++ +g+Wk   + ++v +   k++  gl k + +   ++++ ++  W+mh
  Prupe.1G575600.1.p  29 NKKEPWDIWNdlggKNLGKGEDLYFFTKLKLVTGKGSRVARTIGNGTWKGEDRGTTVRDParKNRPLGLCKRFRYE--NDNSDQHGCWIMH 117
                         6889****753444333467799**************************999999998876677789******998..45555799***** PP

                 NAM 125 e 125
                         e
  Prupe.1G575600.1.p 118 E 118
                         8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.8791118IPR003441NAC domain
SuperFamilySSF1019412.88E-215118IPR003441NAC domain
PfamPF023651.2E-1410118IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MAPCEYVDVP IGFKFRPSDA RLLGYYLLNK KEPWDIWNDL GGKNLGKGED LYFFTKLKLV  60
TGKGSRVART IGNGTWKGED RGTTVRDPAR KNRPLGLCKR FRYENDNSDQ HGCWIMHE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G575600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934101e-110KT893410.1 Prunus persica cultivar Xiaobaitao NAC78 mRNA, complete cds.
GenBankKT8934111e-110KT893411.1 Prunus persica cultivar Jinliuzaohong NAC78 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008218760.14e-73PREDICTED: protein CUP-SHAPED COTYLEDON 1-like
TrEMBLA0A251RJG82e-82A0A251RJG8_PRUPE; Uncharacterized protein
STRINGEMJ258052e-82(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.18e-13NAC domain containing protein 45