PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G564300.1.p
Common NamePRUPE_ppa016401mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 562aa    MW: 62068.1 Da    PI: 4.81
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G564300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.3e-30273332159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  Prupe.1G564300.1.p 273 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 332
                         58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-32258334IPR003657WRKY domain
SuperFamilySSF1182901.15E-27266334IPR003657WRKY domain
PROSITE profilePS5081129.161268334IPR003657WRKY domain
SMARTSM007743.2E-37273333IPR003657WRKY domain
PfamPF031064.6E-27274332IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    Send to blast
MGREKEMGLD IDLSLKIDSK QEKQGEDGDQ GEGEEEEEEK EEEEDLNDDD DIEQGAQQEE  60
DEHEPRAQNN NLKAAEAAAG EVEDDASVVE TSLEENNKMK TDQELCVLQM EMSRMKEENK  120
VLRKVVEQTM KDYYDLQMKF TALHQSNQSK DPQTFLSLDG NDPDAVQGPK TIPKRSPLSP  180
THEDMMKESQ LGLSLRLQTS PTTNIQSHGR EEEDDDKEEN NKKEELTRSS LASSLLQNKL  240
QRTELPGISS HVASQPNRKA RVSVRARCES ATMNDGCQWR KYGQKIAKGN PCPRAYYRCT  300
VAPGCPVRKQ VQRCLEDMSI LITTYEGTHN HPLPVGATAM ASTASAAASF MLLDSSNHHL  360
LDGTPSNYTQ ASLPNYYNVP DHRMNPSSHS SSNFRTINSH DPSKGIVLDL TNNFYDHNNT  420
PQNIPMGSSS SAPPGLSNWM MSTSRSASSY QNPNSITSRL LANSTISRSS GVGVEDQRSW  480
RGEENNMSLA ENVTAIASDP KFRVAVAAAI TSLINKENHT ANHPFGPRDG GENGSSTSNN  540
WALDHQSLSA NGKPIRKNSL E*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21260336176WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G564300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224151.10.0probable WRKY transcription factor 9
TrEMBLM5Y1150.0M5Y115_PRUPE; Uncharacterized protein
STRINGEMJ253500.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93203141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.11e-72WRKY DNA-binding protein 9