PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G545700.1.p
Common NamePRUPE_ppa012354mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 174aa    MW: 19078.2 Da    PI: 5.2996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G545700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-191565155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        s y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a++ ++g
  Prupe.1G545700.1.p 15 SSYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 65
                        67*****999.**********8...325***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.05E-221574IPR016177DNA-binding domain
CDDcd000181.34E-231575No hitNo description
PfamPF008473.4E-121565IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-321674IPR001471AP2/ERF domain
SMARTSM003807.1E-401679IPR001471AP2/ERF domain
PROSITE profilePS5103223.6831673IPR001471AP2/ERF domain
PRINTSPR003673.4E-101728IPR001471AP2/ERF domain
PRINTSPR003673.4E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MGEPSSSNAY GAATSSYRGV RKRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVAA  60
LHFRGREARL NFPELVNSLP RPASSNAEDI RMAAHEAALR LRSSPAAEAH EAGSSSSNVG  120
PVTVRLSPSQ IQAINESPLD SPKMWMQMSE SMMFSGGFED QWEDMQNDSL WDP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-181278168ATERF1
3gcc_A7e-181278168ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223585.11e-124hypothetical protein PRUPE_ppa012354mg
SwissprotQ9C9I22e-68ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLM5XFS11e-124M5XFS1_PRUPE; Uncharacterized protein
STRINGPOPTR_0013s10340.14e-82(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-67ERF family protein