PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G508100.12.p
Common NamePRUPE_ppa007593mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 372aa    MW: 42121.3 Da    PI: 7.0244
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G508100.12.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-1075125350
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNkaLkkele 50 
                          ++k++rr+++NReAAr+sR RKka++++Le+   k ++Le+e ++ +k+++
  Prupe.1G508100.12.p  75 SDKVQRRLEQNREAARKSRMRKKAYVQQLETsrlKLAQLEQELERARKQIN 125
                          79****************************855567777777776666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-1070126No hitNo description
SMARTSM003381.3E-773137IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.03675132IPR004827Basic-leucine zipper domain
PfamPF001709.6E-875124IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-777125No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141441.9E-26175248IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MSYPSTQFAT SRQMGIYEPF RQVGVWKETF RGDHSSNTGA SSILEVDAGI ETKIGYVSHE  60
SLAPSGNDQE PNRSSDKVQR RLEQNREAAR KSRMRKKAYV QQLETSRLKL AQLEQELERA  120
RKQINRRLPD LQGAYVASSL GTSHMGYNGA LNSGITTFEM EYGHWVEEQH RQNVELRNAL  180
QDHGTDIELL RILVESGLSH YANLFRMKAD AARADAFYLL SGIWRTSVER HFHWIGGFRP  240
SELLNIVLPQ LQPLDEPQLV DFYNLRQSSQ QAEDALTQGM EKLQQNLALT IAGDQISGEI  300
YGSQMATALE KLEALETFVG QADHLRQQTL QQMSRILTTH QAARGLLALG EYFHRLRALS  360
SLWTAHPREP T*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G508100.12.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411363.10.0transcription factor TGA7 isoform X1
SwissprotQ93ZE21e-150TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A251RG700.0A0A251RG70_PRUPE; Uncharacterized protein
STRINGXP_008233950.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-146bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]