PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G500900.1.p
Common NamePRUPE_ppa010649mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 242aa    MW: 26308.4 Da    PI: 5.708
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G500900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-183585155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  Prupe.1G500900.1.p 35 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 85
                        59*****998.**********9...336************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512576132No hitNo description
CDDcd000181.47E-183593No hitNo description
SMARTSM003807.7E-353699IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-193694IPR016177DNA-binding domain
PfamPF008472.1E-113685IPR001471AP2/ERF domain
PROSITE profilePS5103221.8383693IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-303694IPR001471AP2/ERF domain
PRINTSPR003675.8E-93748IPR001471AP2/ERF domain
PRINTSPR003675.8E-95975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MVKTEQRVQL TETSKPMPSS KTSSTSASSS ACKKKKYKGV RMRSWGSWVS EIRAPNQKTR  60
IWLGSYSTAE AAARAYDAAL LCLKGSSANL NFPSTASSHF IPQEITVMSP KSIQRVAAAA  120
ANSFAIDNAT TPTTTSIASP PSPPPQSSSS SSLVSSPSMS SSPSDDMSSL MGSFEPYTPI  180
YDHHDQAIDQ LPMSSMELWN NFDDGLQSPK YIDQMFNGAF FDPPMIYDFY EESDIPLWSF  240
C*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A3e-153398268ATERF1
2gcc_A3e-153398268ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223803.11e-177hypothetical protein PRUPE_ppa010649mg
SwissprotQ9SFE42e-55ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLM5XFW91e-177M5XFW9_PRUPE; Uncharacterized protein
STRINGPOPTR_0002s08610.19e-74(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-35ERF family protein