PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G432600.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 266aa    MW: 30455.3 Da    PI: 9.5718
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G432600.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM842.9e-26121411127
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                         lppG+rF P++e+l+ +yL +k +++  +    + i+e+d+y+++P dLp +   ++ +  ++ ++F+ + +       k+r +ksgyW+ 
  Prupe.1G432600.3.p  12 LPPGCRFYPSEEQLLRCYLSNKNDADLAQSggYDLIRELDLYDHDPFDLPdSacySYGHAGRKRHWFCYTVRVL-----KERRAKSGYWRR 97 
                         79********************9887744422567**************9535552222334555555555543.....3455699***** PP

                 NAM  86 tgkdkevlsk.kgelvglkktLvfykgrapk.gektdWvmheyr 127
                         +g+d++v+ + ++++ g ++++vfy g++p+ +++tdWv+ +y+
  Prupe.1G432600.3.p  98 KGRDRDVVGRgGKAVLGRRTSFVFYLGNSPNtAVRTDWVLYQYA 141
                         *********9556678*********997665167*********6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-318158IPR003441NAC domain
PROSITE profilePS5100535.11612158IPR003441NAC domain
PfamPF023656.9E-1513141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MGDPKATSLR SLPPGCRFYP SEEQLLRCYL SNKNDADLAQ SGGYDLIREL DLYDHDPFDL  60
PDSACYSYGH AGRKRHWFCY TVRVLKERRA KSGYWRRKGR DRDVVGRGGK AVLGRRTSFV  120
FYLGNSPNTA VRTDWVLYQY AQVDHVKASF VLCRVFVRSR HGNRLSYNGV SSCAEESACT  180
VRHIGIQHDG FHTPNIVETE VHGDNSAHRK NEMLNFPMRL DREINDRVKN GPVSISRLQP  240
NGQVCRQKYP HDSKQMKSIN LWLES*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-211116416171NO APICAL MERISTEM PROTEIN
1ut4_B6e-211116416171NO APICAL MERISTEM PROTEIN
1ut7_A6e-211116416171NO APICAL MERISTEM PROTEIN
1ut7_B6e-211116416171NO APICAL MERISTEM PROTEIN
3swm_A7e-211116419174NAC domain-containing protein 19
3swm_B7e-211116419174NAC domain-containing protein 19
3swm_C7e-211116419174NAC domain-containing protein 19
3swm_D7e-211116419174NAC domain-containing protein 19
3swp_A7e-211116419174NAC domain-containing protein 19
3swp_B7e-211116419174NAC domain-containing protein 19
3swp_C7e-211116419174NAC domain-containing protein 19
3swp_D7e-211116419174NAC domain-containing protein 19
4dul_A6e-211116416171NAC domain-containing protein 19
4dul_B6e-211116416171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G432600.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020410880.10.0NAC domain-containing protein 72 isoform X2
TrEMBLA0A251RC020.0A0A251RC02_PRUPE; Uncharacterized protein
STRINGEMJ256970.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.23e-21NAC family protein