PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G431100.2.p
Common NamePRUPE_ppa007930mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 366aa    MW: 39820.1 Da    PI: 10.0098
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G431100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.3e-31293350359
                         -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
  Prupe.1G431100.2.p 293 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 350
                         99************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105338.3E-17243289IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.5E-32279350IPR003657WRKY domain
PROSITE profilePS5081130.503286352IPR003657WRKY domain
SuperFamilySSF1182901.57E-26288351IPR003657WRKY domain
SMARTSM007742.4E-36291351IPR003657WRKY domain
PfamPF031061.2E-26293349IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MDTLVIRPNS FAAQMEENAV KEAASAGIQS VEKFISLISQ HHHQFQDSSF SSSSNPEAAT  60
EYKAVADMAV NKFRKVISLL DKGRTGHARF RRAPVTPSPP PPPPPPPPPQ KTETQIPRPS  120
IQEPHNPRTD QPPGFKTEQS SAFKVYCPTP SVRLPPLPHN PHLKTTPVVL TKSVGCAERK  180
LDAPTTINFS PSPSISAANS YMSSLTTGDA EGSVQHSMSS GFQFTNMSQS SSGKPPLSSS  240
SLKRKCNSMD DVAALRCGSS SGRCHCSKKR KSKVKRVVRV PAISMKMADI PPDDYSWRKY  300
GQKPIKGSPH PRGYYKCSSQ RGCLARKHVE RALDDPTMLI VTYEGDHNHS HTGTDPTPDL  360
VLESS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-202883491474Probable WRKY transcription factor 4
2lex_A4e-202883491474Probable WRKY transcription factor 4
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.37850.0fruit
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G431100.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409832.10.0probable WRKY transcription factor 7 isoform X2
SwissprotQ9STX01e-107WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A251RBX80.0A0A251RBX8_PRUPE; Uncharacterized protein
STRINGEMJ234560.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-79WRKY DNA-binding protein 7