PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G393100.1.p
Common NamePRUPE_ppa009939mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 286aa    MW: 31719.6 Da    PI: 8.6599
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G393100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.16.4e-2793153159
                         ---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         ++Dgy+WrKYGqK+ k+++  pr+Y++C+ a +Cpvkkkv+r+  d+++++ tYeg+Hnhe
  Prupe.1G393100.1.p  93 VKDGYQWRKYGQKVTKDNPsSPRAYFKCSLApRCPVKKKVQRCMVDKSLLVATYEGQHNHE 153
                         58**************997369*******999****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-2784154IPR003657WRKY domain
PROSITE profilePS5081122.53888155IPR003657WRKY domain
SuperFamilySSF1182905.49E-2289153IPR003657WRKY domain
SMARTSM007746.2E-2993154IPR003657WRKY domain
PfamPF031068.4E-2294153IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MISYCPVALE ILMNMDDHTP TKRKVDALQQ DLLRLRKENE ALRFLLTAMT TKCNTLEQLI  60
REKNSERNDQ FPVAQKTTQF LVRTDSKDNT LIVKDGYQWR KYGQKVTKDN PSSPRAYFKC  120
SLAPRCPVKK KVQRCMVDKS LLVATYEGQH NHEAINGSPL GQFSCSSSTA VHNNNIIINP  180
INFPSHGTSA DINNNDVINI VSPSNSSRPV PITLDLTLSG STSNQENNRS AGSPQNSSSS  240
AQNIDCESRI EDYVAYLTKD HNFTQALAAA VASSITRPSA DRQNQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-18921531372WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G393100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222877.20.0probable WRKY transcription factor 40
TrEMBLA0A251RAA70.0A0A251RAA7_PRUPE; Uncharacterized protein
STRINGEMJ240760.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73983044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-35WRKY DNA-binding protein 40