PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G374400.1.p
Common NamePRUPE_ppa012507mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 167aa    MW: 18956 Da    PI: 7.0404
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G374400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.4e-133085560
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                        ++ +r+q+NRe+ArrsR RK++ ++ L   v +L +eN +    ++  +++  +++
  Prupe.1G374400.1.p 30 RKRKRMQSNRESARRSRMRKQQHLDDLMGQVTQLRKENNQILTSINITTQHLMNVE 85
                        6789**********************************999888877776666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.0E-122281No hitNo description
SMARTSM003381.1E-192690IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.9092891IPR004827Basic-leucine zipper domain
PfamPF001702.1E-103076IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-133083No hitNo description
CDDcd147021.57E-183182No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MASSSGNSSG STQLQNSGSE GDLQHLMDQR KRKRMQSNRE SARRSRMRKQ QHLDDLMGQV  60
TQLRKENNQI LTSINITTQH LMNVEAENSV LKAQMEELSQ RLESLTEILN YINSSNGVFE  120
THEPNNTLLH HHQASASADH NSFINPWNLL YVNQPIMATA DMLHQY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.19821e-170fruit
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in the micropylar endosperm and radicle tip in early germinating seeds. {ECO:0000269|PubMed:23461773}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G374400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223601.11e-119bZIP transcription factor 11
RefseqXP_008221357.11e-119PREDICTED: bZIP transcription factor 53
SwissprotC0Z2L52e-48BZP44_ARATH; bZIP transcription factor 44
TrEMBLM5XZQ21e-118M5XZQ2_PRUPE; Uncharacterized protein
STRINGXP_008221357.11e-118(Prunus mume)
STRINGEMJ248001e-118(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.14e-45basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]