PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G307300.2.p
Common NamePRUPE_ppa019842mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 465aa    MW: 51667.7 Da    PI: 6.4654
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G307300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10178216543
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                         k  rr+++NReAAr+sR+RKka++++Le+    L+   +
  Prupe.1G307300.2.p 178 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLSHLEQ 216
                         788*************************97666665554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-9174245IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-7174221No hitNo description
PROSITE profilePS502179.289176220IPR004827Basic-leucine zipper domain
CDDcd147085.41E-22178230No hitNo description
SuperFamilySSF579599.14E-7178221No hitNo description
PfamPF001709.6E-7178214IPR004827Basic-leucine zipper domain
PROSITE patternPS000360181196IPR004827Basic-leucine zipper domain
PfamPF141441.5E-31263336IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MQSFKAASTN PELYSHSSFY FRGDDTNRNQ TRFTDLGELE QSATVFPHDD AVDLIPSSMF  60
SLKANNVAVV PNNLHYGALN TSTGCLDIGS TITGTGGGCV ETGHHQYMYH QQKGTTSSGN  120
GHFENWGDSA MADNSQQTDD TSTDVDTDDK NQLHGIPHGA LTVVDSMEQP RERSGDQKTL  180
RRLAQNREAA RKSRLRKKAY VQQLENSRLR LSHLEQELQR ARQQGMFIAT GLSGDNGHSM  240
AGNGALAFDL EYARWLDEHQ RLIHDMRSAV NSHTGDNELR ILVDSVMTHY DEIFRLKSIA  300
AKTDVFHMLS GMWKTPAERC FMWLGGFRSS ELLKILGNQL EPLTDQQLMG ICNLQQSSQQ  360
AEDALSQGME ALQQSLVDTL CSGTHGPTGS GNVADYMGQM AIAMGKLATL ENFLHQADLL  420
RQQTLQQMHR ILTTRQAARA LLVISDYFSR LRALSSLWLA RPRD*
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in the apical meristem, the floral meristem, each whorl of organ primordia, and in ovule primordia during wild-type flower development. {ECO:0000269|PubMed:9990857}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1. {ECO:0000269|PubMed:19395638, ECO:0000269|PubMed:19395639, ECO:0000269|PubMed:9990857}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G307300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007226716.10.0transcription factor HBP-1b(c38) isoform X1
SwissprotQ9SX270.0PAN_ARATH; Transcription factor PERIANTHIA
TrEMBLM5Y7H40.0M5Y7H4_PRUPE; Uncharacterized protein
STRINGEMJ279150.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-168bZIP family protein
Publications ? help Back to Top
  1. Maier AT,Stehling-Sun S,Offenburger SL,Lohmann JU
    The bZIP Transcription Factor PERIANTHIA: A Multifunctional Hub for Meristem Control.
    Front Plant Sci, 2011. 2: p. 79
    [PMID:22645551]
  2. Chandler JW,Werr W
    Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
    J. Exp. Bot., 2014. 65(12): p. 3097-110
    [PMID:24744428]
  3. Wynn AN,Seaman AA,Jones AL,Franks RG
    Novel functional roles for PERIANTHIA and SEUSS during floral organ identity specification, floral meristem termination, and gynoecial development.
    Front Plant Sci, 2014. 5: p. 130
    [PMID:24778638]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. de Luis Balaguer MA, et al.
    Predicting gene regulatory networks by combining spatial and temporal gene expression data in Arabidopsis root stem cells.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(36): p. E7632-E7640
    [PMID:28827319]