PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G284900.5.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 245aa    MW: 28241.9 Da    PI: 5.3789
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G284900.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.31.6e-32541843128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 
                         +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp    k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g++
  Prupe.1G284900.5.p  54 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYEHDPDELPsGdfKHGVDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEE 144
                         7*********************************************5444444466799********99963777888************* PP

                 NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +ev+ + ++ +v   k++vf+kg+ap+g +td +mheyr+
  Prupe.1G284900.5.p 145 EEVKYRnGDITVMFEKVMVFHKGTAPNGIETDFIMHEYRV 184
                         ***99845667999************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100533.92852213IPR003441NAC domain
SuperFamilySSF1019416.41E-3252212IPR003441NAC domain
PfamPF023653.4E-1554184IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MASFRLLSWF LEPTQTQSRF IEQSFSHSSP TQTQTKAQCS KIENGKKEAE IHLVGYRFDP  60
SEDQIVVFYL FNKILGRELP INDIIKEISV YEHDPDELPS GDFKHGVDCN EAFYFAYTEQ  120
VYSSRGKITR RTTKSGYWDL DGEEEEVKYR NGDITVMFEK VMVFHKGTAP NGIETDFIMH  180
EYRVNPLIVP THVLNDSIRA KIERYVVCRI IQEGVSNFPL TNFHQDGLLG LLKKQNQIDM  240
TEIA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-224821010165Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G284900.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224054.21e-178NAC transcription factor 29 isoform X1
TrEMBLA0A251R4L60.0A0A251R4L6_PRUPE; Uncharacterized protein
STRINGXP_008221511.11e-157(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.16e-27NAC-like, activated by AP3/PI