PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G284900.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 262aa    MW: 29972 Da    PI: 4.9475
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G284900.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.11.9e-32712013128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 
                         +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp    k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g++
  Prupe.1G284900.3.p  71 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYEHDPDELPsGdfKHGVDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEE 161
                         7*********************************************5444444466799********99963777888************* PP

                 NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +ev+ + ++ +v   k++vf+kg+ap+g +td +mheyr+
  Prupe.1G284900.3.p 162 EEVKYRnGDITVMFEKVMVFHKGTAPNGIETDFIMHEYRV 201
                         ***99845667999************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.85E-3269229IPR003441NAC domain
PROSITE profilePS5100533.92869230IPR003441NAC domain
PfamPF023654.0E-1571201IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MPYSSSFIEQ SFSHSSPTQT QTKAQVIIVL LFMALPCPQS TSQVPETEKD FDLLKCSKIE  60
NGKKEAEIHL VGYRFDPSED QIVVFYLFNK ILGRELPIND IIKEISVYEH DPDELPSGDF  120
KHGVDCNEAF YFAYTEQVYS SRGKITRRTT KSGYWDLDGE EEEVKYRNGD ITVMFEKVMV  180
FHKGTAPNGI ETDFIMHEYR VNPLIVPTHV LNDSIRAKIE RYVVCRIIQE GVSNFPLTNF  240
HQDGLLGLLK KQNQIDMTEI A*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-226523010168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G284900.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414474.10.0NAC transcription factor 29 isoform X2
RefseqXP_020414480.10.0NAC transcription factor 29 isoform X2
RefseqXP_020414484.10.0NAC transcription factor 29 isoform X2
TrEMBLA0A251R4K30.0A0A251R4K3_PRUPE; Uncharacterized protein
STRINGXP_008221511.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.19e-27NAC-like, activated by AP3/PI