PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G284900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 275aa    MW: 31599.9 Da    PI: 5.0805
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G284900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.92.1e-32842143128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 
                         +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp    k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g++
  Prupe.1G284900.1.p  84 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYEHDPDELPsGdfKHGVDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEE 174
                         7*********************************************5444444466799********99963777888************* PP

                 NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +ev+ + ++ +v   k++vf+kg+ap+g +td +mheyr+
  Prupe.1G284900.1.p 175 EEVKYRnGDITVMFEKVMVFHKGTAPNGIETDFIMHEYRV 214
                         ***99845667999************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.02E-3282242IPR003441NAC domain
PROSITE profilePS5100533.92882243IPR003441NAC domain
PfamPF023654.6E-1584214IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MASFRLLSWF LEPTQTQSRF IEQSFSHSSP TQTQTKAQVI IVLLFMALPC PQSTSQVPET  60
EKDFDLLKCS KIENGKKEAE IHLVGYRFDP SEDQIVVFYL FNKILGRELP INDIIKEISV  120
YEHDPDELPS GDFKHGVDCN EAFYFAYTEQ VYSSRGKITR RTTKSGYWDL DGEEEEVKYR  180
NGDITVMFEK VMVFHKGTAP NGIETDFIMH EYRVNPLIVP THVLNDSIRA KIERYVVCRI  240
IQEGVSNFPL TNFHQDGLLG LLKKQNQIDM TEIA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-227824310168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G284900.1.p