PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G269200.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 627aa    MW: 68355.6 Da    PI: 7.0006
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G269200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.3e-30279337259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  Prupe.1G269200.2.p 279 HDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 337
                         7**************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-31263339IPR003657WRKY domain
SuperFamilySSF1182905.75E-27271339IPR003657WRKY domain
PROSITE profilePS5081128.621273339IPR003657WRKY domain
SMARTSM007743.8E-36278338IPR003657WRKY domain
PfamPF031062.1E-26280337IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    Send to blast
MEMPKRCSKA MENNNTEENS FLGNTPVEDK TKKSDDGHDE EGTSMEMEIS KGGHGWLAEP  60
EQTNTLMPSS SAGKDRALLK HPQENELQSA KAKMGEVKEE NEKLKLLLSQ IVRNYQSLQM  120
HFLGLLQKDE EAKKSMDPSS SARDQSNEQD EEADELVSLS LGRSSSTDQP RKDEQMKKTS  180
HFSKNGKGDD QEGLNGAGLA LELGCRFEPA ADQSTEVVMK NSSSDNSCGD PKEDDPTEIW  240
PPSKTLKTTR SGDDEVSQQT HLKKARVSVR ARCDAPTMHD GCQWRKYGQK IAKGNPCPRA  300
YYRCTVSPSC PVRKQVQRCA DDMSILITTY EGSHNHPLPM SATAMASTTS AAASMLQSHS  360
SISQQGHTAM APISASTNLQ GLNFSTSTLS QNSRLPQHFY FPNSSISTTN SHPTITLDLT  420
APSPSHFGRF PAAVFSSNPR YPSTRLNFSS SPSSSLDHNN NTLQLQAPWN NNHTAADYLN  480
YGNRVLNQVG STLNMGKQSI FQEPNNLYQS YIQNQKPPPP PLPPPPHQQL MLTETIASAT  540
KTITSNPKFQ SALAAALTSF VGTNNGGSAT TGVRENHHHH QHQSSTSTES ASGLKLKWAE  600
SLTTNPIYPP SPNGIGCASS YLNKSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-19265339174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G269200.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020418088.10.0probable WRKY transcription factor 36 isoform X2
TrEMBLA0A251R4U00.0A0A251R4U0_PRUPE; Uncharacterized protein
STRINGXP_008221663.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.14e-61WRKY DNA-binding protein 72