PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G269200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 635aa    MW: 69145.4 Da    PI: 7.0006
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G269200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.4e-30287345259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  Prupe.1G269200.1.p 287 HDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 345
                         7**************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-31271347IPR003657WRKY domain
SuperFamilySSF1182905.75E-27279347IPR003657WRKY domain
PROSITE profilePS5081128.621281347IPR003657WRKY domain
SMARTSM007743.8E-36286346IPR003657WRKY domain
PfamPF031062.2E-26288345IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 635 aa     Download sequence    Send to blast
MPKRCSKAME NNNTEENSFL GNTPVEDKTK KSDDGHDEEG TSMEMEISKS SSSMDITIQG  60
GHGWLAEPEQ TNTLMPSSSA GKDRALLKHP QENELQSAKA KMGEVKEENE KLKLLLSQIV  120
RNYQSLQMHF LGLLQKDEEA KKSMDPSSSA RDQSNEQDEE ADELVSLSLG RSSSTDQPRK  180
DEQMKKTSHF SKNGKGDDQE GLNGAGLALE LGCRFEPAAD QSTEVVMKNS SSDNSCGDPK  240
EDDPTEIWPP SKTLKTTRSG DDEVSQQTHL KKARVSVRAR CDAPTMHDGC QWRKYGQKIA  300
KGNPCPRAYY RCTVSPSCPV RKQVQRCADD MSILITTYEG SHNHPLPMSA TAMASTTSAA  360
ASMLQSHSSI SQQGHTAMAP ISASTNLQGL NFSTSTLSQN SRLPQHFYFP NSSISTTNSH  420
PTITLDLTAP SPSHFGRFPA AVFSSNPRYP STRLNFSSSP SSSLDHNNNT LQLQAPWNNN  480
HTAADYLNYG NRVLNQVGST LNMGKQSIFQ EPNNLYQSYI QNQKPPPPPL PPPPHQQLML  540
TETIASATKT ITSNPKFQSA LAAALTSFVG TNNGGSATTG VRENHHHHQH QSSTSTESAS  600
GLKLKWAESL TTNPIYPPSP NGIGCASSYL NKSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-19273347174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G269200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007226796.20.0probable WRKY transcription factor 36 isoform X1
TrEMBLA0A251R3S90.0A0A251R3S9_PRUPE; Uncharacterized protein
STRINGXP_008221663.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.14e-61WRKY DNA-binding protein 72