PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G245500.1.p
Common NamePRUPE_ppa024329mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 425aa    MW: 46297 Da    PI: 7.9642
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G245500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.7e-1755104255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  Prupe.1G245500.1.p  55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 104
                         59*******.**********93....35999**********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.38E-2155112IPR016177DNA-binding domain
PROSITE profilePS5103222.11555112IPR001471AP2/ERF domain
SMARTSM003806.1E-3355118IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2955111IPR001471AP2/ERF domain
CDDcd000187.34E-3055111No hitNo description
PfamPF008474.9E-1155104IPR001471AP2/ERF domain
PRINTSPR003672.6E-95667IPR001471AP2/ERF domain
PRINTSPR003672.6E-97894IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MEEAFRRLNG FTRSTEPDPI SDPPRKSTTA TPTNKRMLRD TTTTAGTGTG GGAMRYRGVR  60
RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPSSPPHA  120
AVNDHLLPPF SFHKQSQPCV KRSNGYGAGH SSSWPSVTPF TQYPAANNDD AAASPLNMLF  180
FRNFINSSPN PSPVYNQFPY NISGASSSSS SAALVNTTSC GQPHETNMSA STNFSSTGTG  240
SSSSMTVATS VPLMDITTSS TKPTTHDDHS DFFAVESSDS GLLEEVIHRF FPKPTSKKSM  300
DPPKSADYGR HNMNSIPSSS SQASFVSANQ APRFDGPTKN HPHQHGGVCY NFEELLPQPQ  360
QLGNSFSVGM DYQPQVSQTT QAVPFYNDHV PINVQLGGQD YSMVDNNMFQ YPEFMGGFAA  420
RVQN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-2045111471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G245500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP1649957e-54KP164995.1 Malus domestica AP2/ERF domain transcription factor (EBB1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224760.10.0ethylene-responsive transcription factor ESR2
TrEMBLM5XJ630.0M5XJ63_PRUPE; Uncharacterized protein
STRINGEMJ259590.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.16e-14DORNROSCHEN-like