PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G238200.4.p
Common NamePRUPE_ppa002679mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 403aa    MW: 44349.1 Da    PI: 5.7164
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G238200.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.72.2e-1211382855
             G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55
                         Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Prupe.1G238200.4.p 11 GPKKILDLMNVPWLTRENVASHLQKYRL 38
                        5**************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015571.7E-101038IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.3E-131043IPR009057Homeodomain-like
SuperFamilySSF466891.42E-61142IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MMCNVCLAEV GPKKILDLMN VPWLTRENVA SHLQKYRLYL SRLQKENDIK SSFGGTKHSD  60
YSSKDLQGIL SVQNSINIQQ NDVAHGSYRF SGNNLVAQNA DPKSNEGDIK GIVSEPVAEP  120
KKGTTGNIPD SQKTRSSQMD FNSSYAETQK GLVGNVPDSQ KIRSSQMRVN HSFASVESEV  180
NLTAFDSTIP ATYSWNKIQL EKEHKPLIQL NNGFSKPQLP GPQHHFQADQ LQSIPSISSR  240
PSIPGGDVTG SSKSKPSYSE YTNHHGSHVS PTISPTISAT DSFPGQTKSC VVDHQLSETI  300
STSTSNMKNQ GINLSTDLES AQRNLILGST SPFASLDDEF QICWYQGDCY GMNLELQNVE  360
FSEYTDPTHV TEVPAHLYDA LRFEYPCDPS EYSVLDQGLF IA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G238200.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409742.10.0two-component response regulator ARR11
TrEMBLA0A251R2D80.0A0A251R2D8_PRUPE; Uncharacterized protein
TrEMBLM5XQH60.0M5XQH6_PRUPE; Two-component response regulator
STRINGEMJ281550.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.12e-28response regulator 11