PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G234600.1.p
Common NamePRUPE_ppb012237mg, PRUPE_ppb013470mg, PRUPE_ppb016085mg, PRUPE_ppb018678mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 87aa    MW: 9987.39 Da    PI: 7.784
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G234600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM492e-151675156
                 NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLp.kkvkaeek 56
                        lp+GfrF Ptd+elv++yL +kv +++++++e+i+++d    y+++P++L+ +k+++e+k
  Prupe.1G234600.1.p 16 LPVGFRFMPTDKELVTHYLMNKVFDRPVPAAEAIQDIDatqFYSTHPKNLDsTKIREEKK 75
                        79*************************998888888764448999*****8445544333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.54E-14971IPR003441NAC domain
PROSITE profilePS5100515.2031686IPR003441NAC domain
PfamPF023658.8E-81767IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MEAEHGQEAM MSSGQLPVGF RFMPTDKELV THYLMNKVFD RPVPAAEAIQ DIDATQFYST  60
HPKNLDSTKI REEKKKITEK RKERFS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G234600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020420381.11e-42NAC transcription factor 29-like
TrEMBLM5W3711e-57M5W371_PRUPE; Uncharacterized protein
STRINGEMJ080812e-58(Prunus persica)
STRINGEMJ081592e-58(Prunus persica)
STRINGEMJ228142e-58(Prunus persica)
STRINGEMJ228992e-58(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144391218
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.15e-09NAC domain containing protein 47