PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G195600.4.p
Common NamePRUPE_ppa023771mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 219aa    MW: 25392.6 Da    PI: 6.0469
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G195600.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1842.5e-2667157190
                FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                         +fY eYAk++GF++r+++ ++s +n  i+ r+fvCs+eg+r+ +++  +++   +r+ tr gCka++++  +++g+w vtk+  eHnH+l+
  Prupe.1G195600.4.p  67 DFYYEYAKRTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrKDRVLPPRPITREGCKAMIRLAARDEGRWIVTKFIREHNHKLM 157
                         6*****************************************9998822333349**********************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.1E-2467157IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MEGGDGGRQF LDSDGGSDDE TFESFHEHNY SVEDDMPLQH CNFVNDGLIS MEPSTGMSFQ  60
SLDDARDFYY EYAKRTGFTI RTNRIRHSLK NMAIIGRDFV CSREGFRAAK HTLRKDRVLP  120
PRPITREGCK AMIRLAARDE GRWIVTKFIR EHNHKLMAHC KFPGELPIIN ILSEVEKDKK  180
IQDLYDELQR ERERSAAFQQ QLCMILKDLE EHAEYISE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G195600.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224517.21e-164protein FAR1-RELATED SEQUENCE 5 isoform X2
TrEMBLA0A251QZX91e-162A0A251QZX9_PRUPE; Uncharacterized protein
STRINGEMJ257161e-163(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-38FAR1 family protein