PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G195600.10.p
Common NamePRUPE_ppa023771mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 178aa    MW: 20344 Da    PI: 6.9477
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G195600.10.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.71.5e-2667157190
                 FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                          +fY eYAk++GF++r+++ ++s +n  i+ r+fvCs+eg+r+ +++  +++   +r+ tr gCka++++  +++g+w vtk+  eHnH+l
  Prupe.1G195600.10.p  67 DFYYEYAKRTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrKDRVLPPRPITREGCKAMIRLAARDEGRWIVTKFIREHNHKL 156
                          6*****************************************9998822333349**********************************9 PP

                 FAR1  90 a 90 
                          +
  Prupe.1G195600.10.p 157 M 157
                          6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.5E-2467157IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MEGGDGGRQF LDSDGGSDDE TFESFHEHNY SVEDDMPLQH CNFVNDGLIS MEPSTGMSFQ  60
SLDDARDFYY EYAKRTGFTI RTNRIRHSLK NMAIIGRDFV CSREGFRAAK HTLRKDRVLP  120
PRPITREGCK AMIRLAARDE GRWIVTKFIR EHNHKLMAHC KFPGELPIIN ILSEGFV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G195600.10.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411698.11e-130protein FAR1-RELATED SEQUENCE 5 isoform X1
TrEMBLA0A251QZX11e-130A0A251QZX1_PRUPE; Uncharacterized protein
STRINGEMJ257161e-129(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-28FAR1 family protein