PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G084800.1.p
Common NamePRUPE_ppa022202mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 312aa    MW: 33626 Da    PI: 9.35
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G084800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-203787256
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                        +y GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Prupe.1G084800.1.p 37 RYVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 87
                        699******.7*********43...36**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.10E-323793No hitNo description
SMARTSM003803.2E-3537104IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-293794IPR001471AP2/ERF domain
PROSITE profilePS5103220.6393794IPR001471AP2/ERF domain
PfamPF008471.3E-153787IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-203793IPR016177DNA-binding domain
PRINTSPR003679.7E-83849IPR001471AP2/ERF domain
PRINTSPR003679.7E-86076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MAGPEVLTKT TTATSRPTNN KTMVTKSPST TKTALRRYVG VRQRPSGRWV AEIKDSSQRV  60
RLWLGTYDTP EEAARAYDEA ARALRGENAR TNFVSPGPAT NPNSSPLVSS VSNGGFMSGS  120
DGRHGGTGGL SFSSLKAKLS KNLQSIMARS SDHNKSSKSR VSDHFTFASI FHFRKYQYQN  180
PINPSIDMKN IEKVVQPSII VPHNGEGSTS TEPSSWESSS ISDCSAEWAH GFRQAGVDSE  240
GSEIGEGNIM DQLMGWIDSP DNQMGSRISV GDDDSEEGSR SKRFKVSSSV MVPPTFSTGS  300
PFNNINGETS N*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224906.10.0hypothetical protein PRUPE_ppa022202mg
TrEMBLM5Y2Z90.0M5Y2Z9_PRUPE; Uncharacterized protein
STRINGPOPTR_0014s07280.11e-110(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-16related to AP2 11