PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G037800.1.p
Common NamePRUPE_ppa018601mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 164aa    MW: 18008.7 Da    PI: 7.7673
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G037800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-202475256
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                        +y+GVr+++ +g++++eIrdps +g  +r +lg+f+taeeAa+a+++a+ +l+g+
  Prupe.1G037800.1.p 24 RYRGVRRRP-WGKFASEIRDPSRQG--ARLWLGTFDTAEEAARAYDRAAFNLRGH 75
                        6********.**********96543..**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.5E-152475IPR001471AP2/ERF domain
CDDcd000183.53E-302483No hitNo description
SuperFamilySSF541711.7E-232483IPR016177DNA-binding domain
SMARTSM003806.3E-382488IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-322484IPR001471AP2/ERF domain
PROSITE profilePS5103224.792482IPR001471AP2/ERF domain
PRINTSPR003671.0E-112536IPR001471AP2/ERF domain
PRINTSPR003671.0E-114864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MEDPRRGKDL QKQGMEEKGS EEVRYRGVRR RPWGKFASEI RDPSRQGARL WLGTFDTAEE  60
AARAYDRAAF NLRGHLAILN FPNEYYSQVM GSPPHPPRFS SSFSSSSSSS SSSSSSSSAA  120
AAAAAPGGSS STGQGRQVFE IEYLDDHVLE DLLDSQEEKN KRK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-272582663ATERF1
3gcc_A1e-272582663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224270.11e-116hypothetical protein PRUPE_ppa018601mg
SwissprotQ9LTC59e-50ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLM5XHP91e-116M5XHP9_PRUPE; Uncharacterized protein
STRINGGLYMA20G34560.13e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-38ERF family protein