PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G037700.1.p
Common NamePRUPE_ppa013137mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 139aa    MW: 15204.7 Da    PI: 7.5992
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G037700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.15.8e-201767255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                        +y+GVr ++ +g+++AeIrd    + + +r++lg+f taeeAa+a+++a+ +++g
  Prupe.1G037700.1.p 17 RYRGVRKRP-WGKYAAEIRDS---NrHGARVWLGTFNTAEEAARAYDQAAYAMRG 67
                        6********.**********4...3234*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.9E-351781IPR001471AP2/ERF domain
SuperFamilySSF541714.9E-231777IPR016177DNA-binding domain
PROSITE profilePS5103223.4851775IPR001471AP2/ERF domain
CDDcd000189.16E-261775No hitNo description
PfamPF008472.6E-151767IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-311776IPR001471AP2/ERF domain
PRINTSPR003678.1E-121829IPR001471AP2/ERF domain
PRINTSPR003678.1E-124157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MDSRGKVMEE KEGGEVRYRG VRKRPWGKYA AEIRDSNRHG ARVWLGTFNT AEEAARAYDQ  60
AAYAMRGGLA ILNFPTEYPA SGGSSSSSSS ANFSSSVAGT SQGRGRGEHG NEVLELEYLD  120
DKLLEELLDC DHQKKNKK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-3511231114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G037700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223771.12e-98ethylene-responsive transcription factor ERF095
SwissprotQ9LTC53e-39ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLM5Y0546e-97M5Y054_PRUPE; Uncharacterized protein
STRINGEMJ249701e-97(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.15e-24ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]