PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008241430.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 202aa    MW: 21495.6 Da    PI: 4.7156
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008241430.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-172776255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+ +l+g
  XP_008241430.1 27 TYRGVRRRS-SGKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAAIALKG 76
                    69****888.8*********94....478**********************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.4E-302786IPR001471AP2/ERF domain
PROSITE profilePS5103222.9582784IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-212786IPR016177DNA-binding domain
PfamPF008471.7E-102776IPR001471AP2/ERF domain
SMARTSM003802.5E-352790IPR001471AP2/ERF domain
CDDcd000184.92E-312886No hitNo description
PRINTSPR003676.3E-112839IPR001471AP2/ERF domain
PRINTSPR003676.3E-116686IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MHTSNSTSSS STTNTTTTST TPGRHPTYRG VRRRSSGKWV SEIREPRKPN RIWLGTFPTP  60
EMAAVAYDVA AIALKGRDAE LNFPNSASSL PVPASSSSRD IQAAAASAAA AIGAAAAAMG  120
VGNDDSHSTS EVQAQGHRTI EAADRVALSD HQFVDEDLIF DMPNVLVNMA EGMLLSPPRL  180
DIADDDVVGA DQEDDQNLWK FN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1525861274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008241430.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008241430.11e-146PREDICTED: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR05e-56ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLM5VT941e-143M5VT94_PRUPE; Uncharacterized protein
STRINGXP_008241430.11e-146(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-38ERF family protein