PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008240277.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 365aa    MW: 40916.5 Da    PI: 4.5129
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008240277.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.73.8e-15114159352
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                     ykGVr++k +g+++AeIrdp     +  r +lg+f taeeAa+a+ + +++
  XP_008240277.1 114 YKGVRRRK-WGKYAAEIRDPI----QrCRTWLGTFATAEEAAAAYQKKKLE 159
                     9****998.**********83....359*****************888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.45E-12112144No hitNo description
SuperFamilySSF541711.11E-15112160IPR016177DNA-binding domain
SMARTSM003805.2E-17113183IPR001471AP2/ERF domain
PROSITE profilePS5103218.637113177IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.2E-21113160IPR001471AP2/ERF domain
PRINTSPR003671.3E-8114125IPR001471AP2/ERF domain
PfamPF008471.7E-8114158IPR001471AP2/ERF domain
PRINTSPR003671.3E-8136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MPGFKTLVLN QHVKLSKLKT KQPNKEENTS SVKRIRIIYN DPDATDSSSD DEEYDGKEDR  60
LLHDKRFVSE ILVVDTKYEP SADVLSHCKT NGGKIGLSMN FYDCKKTKRS SSMYKGVRRR  120
KWGKYAAEIR DPIQRCRTWL GTFATAEEAA AAYQKKKLEF DSIQSLGKTQ RDYQNLQLSD  180
KDKGAFESFQ LTERTKHEFQ GIPLSEESQD SLGDADIETS SAEETKRVFC HPSPSSVLEI  240
SGTASLDIGL KQVKEESSVE VFGGDGSVQP FFEEDLSILK FPEEAMLPLD NEQLDLGCGE  300
NYVFSSLDQF FDGMSDIADT GLSDIVDYPA FNDGNGKAIC LPTLDSDFGQ QDFAWIDQNL  360
NMACP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114120KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008240277.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695520.0KT369552.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 20 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008240277.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A0M5KTZ20.0A0A0M5KTZ2_9ROSA; AP2/EREBP family transcription factor-like protein 20
STRINGXP_008240277.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-25ERF family protein