PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008238801.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 222aa    MW: 24134.3 Da    PI: 6.9477
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008238801.2genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.1e-1552100154
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                     s+y+G+r ++  g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+
  XP_008238801.2  52 SRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAAAAYDVAALALK 100
                     78****9.55.7*********843...5**********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.41E-1452111No hitNo description
SuperFamilySSF541712.75E-1752111IPR016177DNA-binding domain
PfamPF008471.6E-952100IPR001471AP2/ERF domain
SMARTSM003805.5E-2453115IPR001471AP2/ERF domain
PROSITE profilePS5103219.13753109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-2453110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MNREKAPPST TPFYTKPSHI LLSLSSPPEL VQLLKHPPLP TTMASSSCGK HSRYHGIRCR  60
GGKWVSEIRE PRKTRRIWLG TYPTPEMAAA AYDVAALALK RGDAVLNFPS SIASYPVPAS  120
TSPEDIRSAA AAAAAAALQW NEEANNSLKQ RESQKKQEND MRMMMNSSSL ASSVGIDEEE  180
LFGMPNLLTE MAEGMLLSPP RPPDYPDSSG NSDGGESGLW SF
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008238801.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008238801.21e-163PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ901e-41ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLM5WDQ51e-107M5WDQ5_PRUPE; Uncharacterized protein
STRINGXP_008238801.11e-129(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-35ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]