PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008235440.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 231aa    MW: 26387.7 Da    PI: 9.2742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008235440.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99.2e-12108149351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_008235440.1 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 149
                     79**98..47*********4.....5********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.5E-6107150IPR001471AP2/ERF domain
SMARTSM003801.3E-4107164IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-8108152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-6110154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGVSPVL DPLPRLCDNG TVPQNFTWTN PVSVHPMPSN DANQPDGNAS  60
VKVEARSPTA SGSSLSKEQH DQQVAGPPIK RRKRHRRKHF QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA ARLYDRAAFM CGREPNFELS EEEKQELRKF KWDEFLAMTR  180
HAITNKKHRR RPGAESHKRS ETPLENGDWD DKEEVDSLSA SEDMEQDMLG S
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008235440.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008235440.11e-174PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_016650838.11e-174PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A251N0E61e-170A0A251N0E6_PRUPE; Uncharacterized protein
STRINGXP_008235440.11e-174(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.19e-48ERF family protein