PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008225440.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 264aa    MW: 29573.5 Da    PI: 5.5313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008225440.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19126176255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd    + k +r++lg+f taeeAa a+++a+++++g
  XP_008225440.1 126 HYRGVRRRP-WGKYAAEIRDsT--R-KGARVWLGTFETAEEAALAYDKAALRIRG 176
                     8********.**********32..2.24*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.44E-30125184No hitNo description
Gene3DG3DSA:3.30.730.105.2E-32125185IPR001471AP2/ERF domain
PROSITE profilePS5103223.828126184IPR001471AP2/ERF domain
SMARTSM003801.7E-37126190IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-23126186IPR016177DNA-binding domain
PfamPF008473.0E-14126176IPR001471AP2/ERF domain
PRINTSPR003673.2E-11127138IPR001471AP2/ERF domain
PRINTSPR003673.2E-11150166IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MAVHSDPHAA EVASEAILEN VWASFIGVDG VKEEAKKTTE LSKPWKELPP LDGREGSMEI  60
LERLPSLGRW ISMGTEAWQE LLDSCVVPGH NMEVSSNVKL EGNGATNSEF EAKVEKRREK  120
VEIMKHYRGV RRRPWGKYAA EIRDSTRKGA RVWLGTFETA EEAALAYDKA ALRIRGSKAN  180
LNFPLETVAK AMGLDCFNIC SSTNVPNSRK RALREWEESV EAMTDGKPAL KRKASMKNML  240
GDEFDVFEFQ DLGSEYLDSL LSSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-29125187163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-29125187466ATERF1
3gcc_A3e-29125187466ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008225440.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008225440.10.0PREDICTED: ethylene-responsive transcription factor ERF091
TrEMBLA0A251PG900.0A0A251PG90_PRUPE; Uncharacterized protein
STRINGXP_008225440.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95473142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-42ERF family protein