PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008223787.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 311aa    MW: 33603 Da    PI: 8.9715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008223787.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-203787256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  XP_008223787.1 37 RYVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 87
                    699******.7*********43...36**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.04E-323793No hitNo description
SMARTSM003803.2E-3537104IPR001471AP2/ERF domain
PfamPF008471.3E-153787IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-293794IPR001471AP2/ERF domain
PROSITE profilePS5103220.6393794IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-203793IPR016177DNA-binding domain
PRINTSPR003679.7E-83849IPR001471AP2/ERF domain
PRINTSPR003679.7E-86076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MAGPEVFTKT TTATSSPTNN KTMVTKSPSI TKTALRRYVG VRQRPSGRWV AEIKDSSQRV  60
RLWLGTYDTP EEAARAYDEA ARALRGENAR TNFVSPGPAT NPNSSPLVSS VSNGGFMSGS  120
DGRHGGTGGL SFSSLKAKLS KNLQSIMARS SDHNKSSKSR VSDHFTFASI FHFRKYQYQN  180
PINPSIDMKN IEKVVQPSII VPHNGEGSTS TEPSSWESSS ISDCSAEWAH GFRQAGVDSE  240
GSEIGEGNIM DQIMGWIDSP DNQMGSRISV GDDDSEEGSR SKRFKVSSSV MVPPTFSTGS  300
PFNNINGETS N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1437931471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008223787.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008223787.10.0PREDICTED: ethylene-responsive transcription factor CRF4-like
TrEMBLA0A251QUH80.0A0A251QUH8_PRUPE; Uncharacterized protein
STRINGXP_008223787.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-16related to AP2 11